Citoplazmatski poliadenilacijski element sa vezanim proteinom 1 jest protein koji je kod ljudi kodiran genom CPEB1.[5][6]

CPEB1
Dostupne strukture
PDBPretraga ortologa: PDBe RCSB
Spisak PDB ID kodova

2M13, 2MKH, 2MKK, 2N1O

Identifikatori
AliasiCPEB1
Vanjski ID-jeviOMIM: 607342 MGI: 108442 HomoloGene: 7278 GeneCards: CPEB1
Lokacija gena (čovjek)
Hromosom 15 (čovjek)
Hrom.Hromosom 15 (čovjek)[1]
Hromosom 15 (čovjek)
Genomska lokacija za CPEB1
Genomska lokacija za CPEB1
Bend15q25.2Početak82,543,201 bp[1]
Kraj82,648,861 bp[1]
Lokacija gena (miš)
Hromosom 7 (miš)
Hrom.Hromosom 7 (miš)[2]
Hromosom 7 (miš)
Genomska lokacija za CPEB1
Genomska lokacija za CPEB1
Bend7|7 D3Početak80,996,774 bp[2]
Kraj81,105,213 bp[2]
Ontologija gena
Molekularna funkcija vezivanje iona metala
mRNA 3'-UTR AU-rich region binding
translation factor activity, RNA binding
vezivanje sa RNK
nucleic acid binding
ribosome binding
translation repressor activity, mRNA regulatory element binding
mRNA 3'-UTR binding
translation regulator activity
GO:0001948, GO:0016582 vezivanje za proteine
Ćelijska komponenta sinapsa
projekcija ćelije
međućelijske veze
neuron projection
messenger ribonucleoprotein complex
GO:0097483, GO:0097481 postsynaptic density
postsynaptic membrane
membrana
P-tijelo
dendrit
ćelijska membrana
citoplazma
jedro
nukleoplazma
citosol
Biološki proces cellular response to insulin stimulus
regulation of translation
negative regulation of cytoplasmic translation
mRNA processing
cellular response to amino acid stimulus
cellular response to hypoxia
Biosinteza bjelančevina
positive regulation of mRNA polyadenylation
Izvori:Amigo / QuickGO
Ortolozi
VrsteČovjekMiš
Entrez
Ensembl
UniProt
RefSeq (mRNK)
NM_030594
NM_001079533
NM_001079534
NM_001079535
NM_001288819

NM_001288820

NM_001252525
NM_001252526
NM_007755
NM_001357107

RefSeq (bjelančevina)
NP_001073001
NP_001073002
NP_001073003
NP_001275748
NP_001275749

NP_085097
NP_001352169
NP_001352170
NP_001352171
NP_001352172
NP_001352173
NP_001352174
NP_001352175
NP_001352176
NP_001352177
NP_001352178
NP_001352179

NP_001239454
NP_001239455
NP_031781
NP_001344036

Lokacija (UCSC)Chr 15: 82.54 – 82.65 MbChr 7: 81 – 81.11 Mb
PubMed pretraga[3][4]
Wikipodaci
Pogledaj/uredi – čovjekPogledaj/uredi – miš

Ovaj gen kodira člana citoplazmatskog elementa poliadenilacije (CPE) koji se veže porodicu proteina. Ovaj visoko konzervirani protein vezuje se za specifičnu sekvencu RNK koja se naziva CPE, u 3'UTR nekih iRNK. Slični proteini u žabljem rodu Xenopus i miševima funkcioniraju da indukuju citoplazmatsku poliadenilaciju utišanih iRNK s kratkim poliA repovima, što rezultira njihovim translacijama. Članovi ove porodice proteina regulišu translaciju ciklina B1 tokom embrionskih ćelijskih dioba. Za ovaj gen je pronađeno više transkripata, varijanti koje kodiraju različite izoforme.[6]

Aminokiselinska sekvenca

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Dužina polipeptidnog lanca je 566 aminokiselina, a molekulska težina 62.595 Da.[7].

1020304050
MALSLEEEAGRIKDCWDNQEAPALSTCSNANIFRRINAILDNSLDFSRVC
TTPINRGIHDHLPDFQDSEETVTSRMLFPTSAQESSRGLPDANDLCLGLQ
SLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPLGNVLGKPPLSFLPLD
PLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGSDHLSD
LISSLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSA
SKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQAAAVNEATCTWSGQLP
PRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPR
CPPKGNMPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRR
MRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAIL
NDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF
TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGL
RHHSPLMRNQKNRDSS
Simboli

Reference

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  1. ^ a b c ENSG00000214575 GRCh38: Ensembl release 89: ENSG00000277445, ENSG00000214575 - Ensembl, maj 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000025586 - Ensembl, maj 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Welk JF, Charlesworth A, Smith GD, MacNicol AM (Mar 2001). "Identification and characterization of the gene encoding human cytoplasmic polyadenylation element binding protein". Gene. 263 (1–2): 113–20. doi:10.1016/S0378-1119(00)00588-6. PMID 11223249.
  6. ^ a b "Entrez Gene: CPEB1 cytoplasmic polyadenylation element binding protein 1".
  7. ^ "UniProt, Q9BZB8". Pristupljeno 13. 7. 2021.

Dopunska literatura

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Vanjski linkovi

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